Homemade Protein Bagels Step By Step

Highlighted under: Easy Meals

I love making my own protein bagels at home because they are not just tasty but incredibly fulfilling. These bagels are perfect for breakfast or a quick snack, packed with the goodness of protein to keep me energized throughout the day. The best part is that they are simple to make from scratch. With just a few ingredients, I can whip up a batch of these delicious bagels that are both chewy and soft. It’s a rewarding experience crafting something so wholesome and satisfying right from my kitchen.

Rosalie Mitchell

Created by

Rosalie Mitchell

Last updated on 2026-01-22T09:49:10.155Z

When I first attempted making protein bagels, I was amazed at how easy it was to combine healthy ingredients without compromising on flavor. The secret lies in using Greek yogurt, which keeps the dough moist and adds a creamy texture. I experimented with various seasonings and toppings, discovering that everything from sesame seeds to everything bagel seasoning brings a delightful twist.

After several tries, I found that the method of boiling the bagels before baking makes all the difference, creating that iconic chewy exterior. Each time I pull them out of the oven, the smell of freshly baked bagels fills my kitchen, making it hard to resist snacking on one while they're still warm!

Why You Will Love These Bagels

  • High in protein to keep you full longer
  • Soft and chewy with a perfectly golden crust
  • Customizable with your favorite toppings and flavors

Understanding the Ingredients

Choosing the right ingredients is crucial for achieving the perfect protein bagels. Low-fat Greek yogurt is the star ingredient, providing moisture and richness while ensuring a good protein boost. It's essential to use whole wheat flour, as it adds fiber and a nutty flavor that enhances the overall taste of the bagels. If you don’t have whole wheat flour on hand, you can substitute with all-purpose flour, but be aware that this may slightly alter the texture and nutritional content.

Baking powder serves as the leavening agent in this recipe, helping the bagels rise and creating that desirable chewy texture. It’s important to ensure your baking powder is fresh; expired baking powder can lead to dense bagels that don’t rise properly. Lastly, adding salt balances the flavors, enhancing the overall profile of the bagel. Remember, quality ingredients will result in a better bagel, so choose fresh products when possible.

Perfecting Your Technique

Kneading the dough just enough is key to achieving a soft, chewy texture. Aim for about 5 minutes of kneading until the dough is smooth but not overly worked; over-kneading can lead to tougher bagels. If the dough feels too sticky, you can lightly flour your hands and the surface, but avoid incorporating too much extra flour, as this may make the bagels dense. On the flip side, if it feels too dry, adding a tablespoon of yogurt can help bring it back to the right consistency.

When shaping the bagels, ensure that the hole in the center is large enough; as they bake, they will expand, and if the hole is too small, it can close up during baking. If you're feeling creative, consider twisting the dough or varying the sizes for different bagel types. After boiling, the glossy surface will provide a sturdy structure that allows the toppings to adhere better. If you're using toppings like seeds or spices, pressing them gently after brushing with egg wash will help them stick.

Ingredients

Gather these ingredients to make your homemade protein bagels.

Ingredients for Protein Bagels

  • 1 cup low-fat Greek yogurt
  • 1.5 cups whole wheat flour
  • 1 tablespoon baking powder
  • 1 teaspoon salt
  • 1 egg (for egg wash)
  • Toppings of choice (sesame seeds, poppy seeds, etc.)

Ensure everything is measured accurately for the best results.

Instructions

Follow these simple steps to create your delicious protein bagels.

Prepare the Dough

In a mixing bowl, combine the Greek yogurt, whole wheat flour, baking powder, and salt. Mix until a dough forms, and knead it for a few minutes on a floured surface until smooth.

Shape the Bagels

Divide the dough into six equal pieces. Roll each piece into a long rope and then form it into a circle, pinching the ends together to seal.

Boil the Bagels

Bring a large pot of water to a boil. Carefully drop the shaped bagels into the boiling water, cooking them for about 30 seconds on each side. Remove them with a slotted spoon.

Bake the Bagels

Preheat the oven to 375°F (190°C). Place the boiled bagels on a baking sheet lined with parchment paper. Brush the tops with beaten egg and sprinkle your chosen toppings. Bake for 20-25 minutes until golden brown.

Allow the bagels to cool slightly before enjoying them fresh from the oven.

Pro Tips

  • Feel free to experiment with different types of flour or add herbs and spices to the dough for extra flavor.

Storage and Make-Ahead Tips

These protein bagels are perfect for meal prep! After baking, let them cool completely on a wire rack to avoid sogginess. Once cooled, store them in an airtight container at room temperature for up to two days. For longer storage, these bagels freeze beautifully. Wrap each bagel tightly in plastic wrap, then place them in a freezer-safe bag or container. They can be frozen for up to three months. When ready to enjoy, simply toast them straight from the freezer for a fresh taste.

If you plan on using the bagels for breakfast throughout the week, consider slicing them before freezing. This way, you can quickly pop them in the toaster without waiting for them to defrost. Reheating in a toaster or oven at 350°F (175°C) for about 5-7 minutes will bring back their chewy texture and warmth, making them taste freshly baked.

Exploring Flavor Variations

One of the best things about homemade protein bagels is how easily customizable they are. Feel free to experiment with different flavor add-ins; shredded cheese, minced garlic, or fresh herbs mixed into the dough can elevate your bagel game significantly. For a sweet twist, adding cinnamon and a touch of honey to the dough can create a delightful breakfast option that pairs perfectly with cream cheese or almond butter.

For a visual and flavor boost, consider adding toppings such as everything bagel seasoning, which combines sesame seeds, poppy seeds, garlic powder, and onion flakes. You can also play with texture and color by incorporating different seeds or even finely chopped veggies atop the egg wash. This way, your bagels not only taste incredible but also look beautiful on your breakfast table.

Questions About Recipes

→ Can I use plain yogurt instead of Greek yogurt?

It's best to use Greek yogurt for the desired texture and protein content, but plain yogurt can be used in a pinch. However, you may need to adjust the flour content.

→ How can I store the bagels?

Store the bagels in an airtight container at room temperature for up to three days. For longer storage, freeze them in a single layer and transfer to a freezer bag.

→ Can I add flavors to the dough?

Absolutely! You can add garlic powder, onion powder, or even shredded cheese to the dough for added flavor.

→ What should I serve with my protein bagels?

These bagels are delicious with cream cheese, avocado, smoked salmon, or as a base for a breakfast sandwich.

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Homemade Protein Bagels Step By Step

I love making my own protein bagels at home because they are not just tasty but incredibly fulfilling. These bagels are perfect for breakfast or a quick snack, packed with the goodness of protein to keep me energized throughout the day. The best part is that they are simple to make from scratch. With just a few ingredients, I can whip up a batch of these delicious bagels that are both chewy and soft. It’s a rewarding experience crafting something so wholesome and satisfying right from my kitchen.

Prep Time20 minutes
Cooking Duration25 minutes
Overall Time45 minutes

Created by: Rosalie Mitchell

Recipe Type: Easy Meals

Skill Level: Beginner

Final Quantity: 6 bagels

What You'll Need

Ingredients for Protein Bagels

  1. 1 cup low-fat Greek yogurt
  2. 1.5 cups whole wheat flour
  3. 1 tablespoon baking powder
  4. 1 teaspoon salt
  5. 1 egg (for egg wash)
  6. Toppings of choice (sesame seeds, poppy seeds, etc.)

How-To Steps

Step 01

In a mixing bowl, combine the Greek yogurt, whole wheat flour, baking powder, and salt. Mix until a dough forms, and knead it for a few minutes on a floured surface until smooth.

Step 02

Divide the dough into six equal pieces. Roll each piece into a long rope and then form it into a circle, pinching the ends together to seal.

Step 03

Bring a large pot of water to a boil. Carefully drop the shaped bagels into the boiling water, cooking them for about 30 seconds on each side. Remove them with a slotted spoon.

Step 04

Preheat the oven to 375°F (190°C). Place the boiled bagels on a baking sheet lined with parchment paper. Brush the tops with beaten egg and sprinkle your chosen toppings. Bake for 20-25 minutes until golden brown.

Extra Tips

  1. Feel free to experiment with different types of flour or add herbs and spices to the dough for extra flavor.

Nutritional Breakdown (Per Serving)

  • Calories: 210 kcal
  • Total Fat: 4g
  • Saturated Fat: 1g
  • Cholesterol: 45mg
  • Sodium: 380mg
  • Total Carbohydrates: 36g
  • Dietary Fiber: 3g
  • Sugars: 1g
  • Protein: 12g